Description

Ensembl ID TCM_005016 Gene ID Accession -
Symbol Alias - Full Name Helicase, C-terminal, Argonaute and Dicer protein, PAZ, Ribonuclease III, bacterial isoform 2
Status Confidence Length 13884 bases Strand Plus strand
Position 1 : 34624834 - 34638717 RNA binding domain ResIII , DEAD , DND1_DSRM , dsrm , Ribonucleas_3_3 , PAZ , Dicer_dimer , Ribonuclease_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
EOX95543 ResIII PF04851 6.7e-13 1
EOX95543 DEAD PF00270 1.2e-13 2
EOX95543 DND1_DSRM PF14709 6.7e-15 3
EOX95543 dsrm PF00035 1.3e-17 4
EOX95543 Ribonucleas_3_3 PF14622 4.2e-26 5
EOX95543 PAZ PF02170 9.4e-25 6
EOX95543 Dicer_dimer PF03368 8e-24 7
EOX95543 Ribonuclease_3 PF00636 4.7e-56 8
EOX95543 Ribonuclease_3 PF00636 4.7e-56 9
EOX95544 ResIII PF04851 6.5e-05 1
EOX95544 DND1_DSRM PF14709 4.1e-15 2
EOX95544 dsrm PF00035 7.5e-18 3
EOX95544 Ribonucleas_3_3 PF14622 1.6e-26 4
EOX95544 PAZ PF02170 7.7e-25 5
EOX95544 Dicer_dimer PF03368 3.9e-24 6
EOX95544 Ribonuclease_3 PF00636 2.9e-56 7
EOX95544 Ribonuclease_3 PF00636 2.9e-56 8

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- EOX95544 7017 1610aa EOX95544
- EOX95543 7334 2007aa EOX95543

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TCM_005016

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TCM_005016

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression