RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	T459_34652	Gene ID		Accession	-
Symbol		Alias	-	Full Name	ATP synthase subunit alpha, chloroplastic
Status	Confidence	Length	6564 bases	Strand	Plus strand
Position	PGAv.1.6.scaffold1738 : 59251 - 65814	RNA binding domain	Ribosomal_S2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PHT61500	Ribosomal_S2	PF00318	1.7e-40	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PHT61500	1695	564aa	PHT61500

Gene Model

Click here to download T459_34652's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download T459_34652's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
T459_34652

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
T459_34652

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression