Description

Ensembl ID SORBI_3005G111700 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 28641 bases Strand Minus strand
Position 5 : 36865778 - 36894418 RNA binding domain zf-CCCH , zf-CCCH_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
OQU83419 zf-CCCH PF00642 3.9e-45 1
OQU83419 zf-CCCH PF00642 3.9e-45 2
OQU83419 zf-CCCH PF00642 3.9e-45 3
OQU83419 zf-CCCH PF00642 3.9e-45 4
OQU83419 zf-CCCH PF00642 3.9e-45 5
OQU83419 zf-CCCH_2 PF14608 4.1e-17 6
OQU83419 zf-CCCH_2 PF14608 4.1e-17 7
OQU83419 zf-CCCH_2 PF14608 4.1e-17 8
OQU83419 zf-CCCH_2 PF14608 4.1e-17 9
OQU83419 zf-CCCH_2 PF14608 4.1e-17 10
OQU83418 zf-CCCH PF00642 5e-36 1
OQU83418 zf-CCCH PF00642 5e-36 2
OQU83418 zf-CCCH PF00642 5e-36 3
OQU83418 zf-CCCH PF00642 5e-36 4
OQU83418 zf-CCCH_2 PF14608 1.6e-13 5
OQU83418 zf-CCCH_2 PF14608 1.6e-13 6
OQU83418 zf-CCCH_2 PF14608 1.6e-13 7
OQU83418 zf-CCCH_2 PF14608 1.6e-13 8

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- OQU83419 1341 446aa OQU83419
- OQU83418 1837 337aa OQU83418

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SORBI_3005G111700

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SORBI_3005G111700

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression