RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	SORBI_3003G334100	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Zinc finger protein VAR3, chloroplastic
Status	Confidence	Length	3884 bases	Strand	Plus strand
Position	3 : 65769023 - 65772906	RNA binding domain	zf-RanBP
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
EES01648	zf-RanBP	PF00641	1.1e-08	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	EES01648	3271	899aa	EES01648

Gene Model

Click here to download SORBI_3003G334100's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download SORBI_3003G334100's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SORBI_3003G334100

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SORBI_3003G334100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression