RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	SORBI_3003G058900	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Transcription initiation factor TFIID subunit 15b
Status	Confidence	Length	3545 bases	Strand	Minus strand
Position	3 : 5180288 - 5183832	RNA binding domain	zf-RanBP , RRM_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
KXG31803	zf-RanBP	PF00641	5.5e-07	1
KXG31803	RRM_1	PF00076	3.5e-08	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	KXG31803	1485	494aa	KXG31803

Gene Model

Click here to download SORBI_3003G058900's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download SORBI_3003G058900's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SORBI_3003G058900

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SORBI_3003G058900

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression