Description

Ensembl ID SORBI_3001G132200 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 12989 bases Strand Plus strand
Position 1 : 10389820 - 10402808 RNA binding domain zf-CCCH , zf-CCCH_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
OQU91174 zf-CCCH PF00642 1.4e-49 1
OQU91174 zf-CCCH PF00642 1.4e-49 2
OQU91174 zf-CCCH PF00642 1.4e-49 3
OQU91174 zf-CCCH PF00642 1.4e-49 4
OQU91174 zf-CCCH PF00642 1.4e-49 5
OQU91174 zf-CCCH PF00642 1.4e-49 6
OQU91174 zf-CCCH PF00642 1.4e-49 7
OQU91174 zf-CCCH_2 PF14608 1.4e-08 8
OQU91174 zf-CCCH_2 PF14608 1.4e-08 9
OQU91174 zf-CCCH_2 PF14608 1.4e-08 10
OQU91174 zf-CCCH_2 PF14608 1.4e-08 11
OQU91174 zf-CCCH_2 PF14608 1.4e-08 12
OQU91173 zf-CCCH PF00642 2.1e-19 1
OQU91173 zf-CCCH PF00642 2.1e-19 2
OQU91173 zf-CCCH PF00642 2.1e-19 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- OQU91174 11436 1486aa OQU91174
- OQU91173 10725 1249aa OQU91173

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SORBI_3001G132200

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SORBI_3001G132200

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression