RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	SIN_1017021	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	2672 bases	Strand	Minus strand
Position	LG2 : 2135066 - 2137737	RNA binding domain	Beta-Casp , RMMBL
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
SIN_1017021	Beta-Casp	PF10996	8.8e-08	1
SIN_1017021	RMMBL	PF07521	3.1e-17	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	SIN_1017021.t	960	319aa	SIN_1017021.t

Gene Model

Click here to download SIN_1017021's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download SIN_1017021's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SIN_1017021

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SIN_1017021

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression