RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | SEVIR_5G404900v2 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
DNA-directed RNA polymerase IV subunit 1 |
Status |
Confidence |
Length |
17752 bases |
Strand |
Minus strand |
Position |
5 : 42237174 - 42254925 |
RNA binding domain |
RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
TKW17988 |
RNA_pol_Rpb1_4 |
PF05000 |
1.8e-09 |
1 |
TKW17988 |
RNA_pol_Rpb1_1 |
PF04997 |
1.1e-11 |
2 |
TKW17988 |
RNA_pol_Rpb1_2 |
PF00623 |
6.2e-28 |
3 |
TKW17988 |
RNA_pol_Rpb1_3 |
PF04983 |
2.8e-20 |
4 |
TKW17995 |
RNA_pol_Rpb1_4 |
PF05000 |
1.8e-09 |
1 |
TKW17995 |
RNA_pol_Rpb1_1 |
PF04997 |
1.1e-11 |
2 |
TKW17995 |
RNA_pol_Rpb1_2 |
PF00623 |
6.2e-28 |
3 |
TKW17995 |
RNA_pol_Rpb1_3 |
PF04983 |
2.8e-20 |
4 |
TKW17986 |
RNA_pol_Rpb1_4 |
PF05000 |
1.8e-09 |
1 |
TKW17986 |
RNA_pol_Rpb1_2 |
PF00623 |
7.2e-28 |
2 |
TKW17986 |
RNA_pol_Rpb1_3 |
PF04983 |
3.3e-20 |
3 |
TKW17991 |
RNA_pol_Rpb1_4 |
PF05000 |
1.8e-09 |
1 |
TKW17991 |
RNA_pol_Rpb1_2 |
PF00623 |
7.2e-28 |
2 |
TKW17991 |
RNA_pol_Rpb1_3 |
PF04983 |
3.3e-20 |
3 |
TKW17987 |
RNA_pol_Rpb1_4 |
PF05000 |
1.8e-09 |
1 |
TKW17987 |
RNA_pol_Rpb1_2 |
PF00623 |
7.2e-28 |
2 |
TKW17987 |
RNA_pol_Rpb1_3 |
PF04983 |
3.3e-20 |
3 |
TKW17992 |
RNA_pol_Rpb1_4 |
PF05000 |
1.8e-09 |
1 |
TKW17992 |
RNA_pol_Rpb1_2 |
PF00623 |
7.2e-28 |
2 |
TKW17992 |
RNA_pol_Rpb1_3 |
PF04983 |
3.3e-20 |
3 |
TKW17989 |
RNA_pol_Rpb1_4 |
PF05000 |
2e-09 |
1 |
TKW17989 |
RNA_pol_Rpb1_1 |
PF04997 |
1.3e-11 |
2 |
TKW17989 |
RNA_pol_Rpb1_2 |
PF00623 |
7.3e-28 |
3 |
TKW17989 |
RNA_pol_Rpb1_3 |
PF04983 |
3.5e-20 |
4 |
TKW17994 |
RNA_pol_Rpb1_4 |
PF05000 |
2e-09 |
1 |
TKW17994 |
RNA_pol_Rpb1_1 |
PF04997 |
1.3e-11 |
2 |
TKW17994 |
RNA_pol_Rpb1_2 |
PF00623 |
7.3e-28 |
3 |
TKW17994 |
RNA_pol_Rpb1_3 |
PF04983 |
3.5e-20 |
4 |
TKW17990 |
RNA_pol_Rpb1_4 |
PF05000 |
2e-09 |
1 |
TKW17990 |
RNA_pol_Rpb1_1 |
PF04997 |
1.1e-11 |
2 |
TKW17990 |
RNA_pol_Rpb1_2 |
PF00623 |
7.2e-28 |
3 |
TKW17990 |
RNA_pol_Rpb1_3 |
PF04983 |
3.5e-20 |
4 |
TKW17993 |
RNA_pol_Rpb1_4 |
PF05000 |
2e-09 |
1 |
TKW17993 |
RNA_pol_Rpb1_1 |
PF04997 |
1.1e-11 |
2 |
TKW17993 |
RNA_pol_Rpb1_2 |
PF00623 |
7.2e-28 |
3 |
TKW17993 |
RNA_pol_Rpb1_3 |
PF04983 |
3.5e-20 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
TKW17986 |
4089 |
1362aa |
TKW17986 |
- |
TKW17993 |
10554 |
1450aa |
TKW17993 |
- |
TKW17987 |
5871 |
1361aa |
TKW17987 |
- |
TKW17988 |
3891 |
1296aa |
TKW17988 |
- |
TKW17994 |
4356 |
1451aa |
TKW17994 |
- |
TKW17990 |
10553 |
1450aa |
TKW17990 |
- |
TKW17989 |
10587 |
1451aa |
TKW17989 |
- |
TKW17995 |
3891 |
1296aa |
TKW17995 |
- |
TKW17991 |
4089 |
1362aa |
TKW17991 |
- |
TKW17992 |
10693 |
1361aa |
TKW17992 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
SEVIR_5G404900v2 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
SEVIR_5G404900v2 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |