Description

Ensembl ID SEVIR_5G236500v2 Gene ID Accession -
Symbol Alias - Full Name Polypyrimidine tract-binding protein homolog 2
Status Confidence Length 6757 bases Strand Minus strand
Position 5 : 28554099 - 28560855 RNA binding domain RRM_5 , RRM_8 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TKW15420 RRM_5 PF13893 2.4e-12 1
TKW15420 RRM_5 PF13893 2.4e-12 2
TKW15420 RRM_8 PF11835 4.3e-11 3
TKW15420 RRM_1 PF00076 2.3e-20 4
TKW15420 RRM_1 PF00076 2.3e-20 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TKW15420 3702 561aa TKW15420

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SEVIR_5G236500v2

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SEVIR_5G236500v2

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression