Description

Ensembl ID SEVIR_3G331700v2 Gene ID Accession -
Symbol Alias - Full Name DNA mismatch repair protein MSH2
Status Confidence Length 9571 bases Strand Minus strand
Position 3 : 30014389 - 30023959 RNA binding domain MutS_II
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TKW28130 MutS_II PF05188 2.3e-24 1
TKW28128 MutS_II PF05188 2.6e-24 1
TKW28129 MutS_II PF05188 3e-24 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TKW28128 3632 943aa TKW28128
- TKW28130 3381 906aa TKW28130
- TKW28129 3323 892aa TKW28129

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SEVIR_3G331700v2

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SEVIR_3G331700v2

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression