Description

Ensembl ID SEVIR_3G233600v2 Gene ID Accession -
Symbol Alias - Full Name Polypyrimidine tract-binding protein homolog 3
Status Confidence Length 5195 bases Strand Plus strand
Position 3 : 17951135 - 17956329 RNA binding domain RRM_5 , RRM_8 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TKW27071 RRM_5 PF13893 9.9e-40 1
TKW27071 RRM_5 PF13893 9.9e-40 2
TKW27071 RRM_5 PF13893 9.9e-40 3
TKW27071 RRM_8 PF11835 3.2e-24 4
TKW27071 RRM_1 PF00076 1.6e-30 5
TKW27071 RRM_1 PF00076 1.6e-30 6
TKW27072 RRM_5 PF13893 9.9e-40 1
TKW27072 RRM_5 PF13893 9.9e-40 2
TKW27072 RRM_5 PF13893 9.9e-40 3
TKW27072 RRM_8 PF11835 3.2e-24 4
TKW27072 RRM_1 PF00076 1.6e-30 5
TKW27072 RRM_1 PF00076 1.6e-30 6
TKW27073 RRM_5 PF13893 9.9e-40 1
TKW27073 RRM_5 PF13893 9.9e-40 2
TKW27073 RRM_5 PF13893 9.9e-40 3
TKW27073 RRM_8 PF11835 3.2e-24 4
TKW27073 RRM_1 PF00076 1.6e-30 5
TKW27073 RRM_1 PF00076 1.6e-30 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TKW27073 2248 444aa TKW27073
- TKW27072 1875 444aa TKW27072
- TKW27071 2212 444aa TKW27071

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SEVIR_3G233600v2

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SEVIR_3G233600v2

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression