Description

Ensembl ID SEVIR_1G019000v2 Gene ID Accession -
Symbol Alias - Full Name DEAD-box ATP-dependent RNA helicase 58, chloroplastic
Status Confidence Length 4074 bases Strand Minus strand
Position 1 : 1581405 - 1585478 RNA binding domain ResIII , DEAD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TKW37001 ResIII PF04851 0.00011 1
TKW37001 DEAD PF00270 1.1e-30 2
TKW37002 ResIII PF04851 0.00011 1
TKW37002 DEAD PF00270 1.1e-30 2
TKW37000 DEAD PF00270 2.2e-29 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TKW37000 2031 453aa TKW37000
- TKW37002 1371 456aa TKW37002
- TKW37001 2037 455aa TKW37001

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SEVIR_1G019000v2

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SEVIR_1G019000v2

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression