Description

Ensembl ID SETIT_000325mg Gene ID Accession -
Symbol Alias - Full Name Pentatricopeptide repeat-containing protein At4g39530
Status Confidence Length 2528 bases Strand Plus strand
Position V : 47127550 - 47130077 RNA binding domain PPR_3 , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KQL08799 PPR_3 PF13812 7.4e-31 1
KQL08799 PPR_3 PF13812 7.4e-31 2
KQL08799 PPR PF01535 2e-70 3
KQL08799 PPR PF01535 2e-70 4
KQL08799 PPR PF01535 2e-70 5
KQL08799 PPR PF01535 2e-70 6
KQL08799 PPR PF01535 2e-70 7
KQL08799 PPR PF01535 2e-70 8
KQL08799 PPR PF01535 2e-70 9
KQL08799 PPR PF01535 2e-70 10
KQL08799 PPR PF01535 2e-70 11
KQL08799 PPR PF01535 2e-70 12
KQL08799 PPR PF01535 2e-70 13

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KQL08799 2528 822aa KQL08799

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SETIT_000325mg

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
SETIT_000325mg

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression