RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	SELMODRAFT_272046	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Signal recognition particle 54 kDa protein
Status	Confidence	Length	2072 bases	Strand	Minus strand
Position	GL377659 : 624678 - 626749	RNA binding domain	SRP54 , SRP54_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
EFJ09798	SRP54	PF00448	2.3e-77	1
EFJ09798	SRP54_N	PF02881	6.9e-15	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	EFJ09798	1567	491aa	EFJ09798

Gene Model

Click here to download SELMODRAFT_272046's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download SELMODRAFT_272046's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SELMODRAFT_272046

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SELMODRAFT_272046

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression