RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	SELMODRAFT_268956	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3787 bases	Strand	Plus strand
Position	GL377631 : 354854 - 358640	RNA binding domain	GTP_EFTU , EFG_IV , MMR_HSR1 , GTP_EFTU_D2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
EFJ13644	GTP_EFTU	PF00009	1.3e-48	1
EFJ13644	EFG_IV	PF03764	2.8e-23	2
EFJ13644	MMR_HSR1	PF01926	9.9e-05	3
EFJ13644	GTP_EFTU_D2	PF03144	1.7e-10	4

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	EFJ13644	3140	982aa	EFJ13644

Gene Model

Click here to download SELMODRAFT_268956's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download SELMODRAFT_268956's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SELMODRAFT_268956

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SELMODRAFT_268956

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression