RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	SELMODRAFT_231460	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3595 bases	Strand	Plus strand
Position	GL377578 : 1994269 - 1997863	RNA binding domain	GTP_EFTU , EFG_IV , MMR_HSR1 , GTP_EFTU_D2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
EFJ28938	GTP_EFTU	PF00009	1.3e-48	1
EFJ28938	EFG_IV	PF03764	2.8e-23	2
EFJ28938	MMR_HSR1	PF01926	9.9e-05	3
EFJ28938	GTP_EFTU_D2	PF03144	1.7e-10	4

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	EFJ28938	2949	982aa	EFJ28938

Gene Model

Click here to download SELMODRAFT_231460's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download SELMODRAFT_231460's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SELMODRAFT_231460

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SELMODRAFT_231460

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression