RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	SELMODRAFT_116315	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1356 bases	Strand	Minus strand
Position	GL377618 : 716112 - 717467	RNA binding domain	eIF2A , Sof1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
EFJ16629	eIF2A	PF08662	3.6e-07	1
EFJ16629	Sof1	PF04158	5.1e-29	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	EFJ16629	1356	451aa	EFJ16629

Gene Model

Click here to download SELMODRAFT_116315's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download SELMODRAFT_116315's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SELMODRAFT_116315

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
SELMODRAFT_116315

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression