RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	RchiOBHm_Chr6g0290841	Gene ID		Accession	-
Symbol		Alias	-	Full Name	putative pre-mRNA processing factor 4 (PRP4)
Status	Confidence	Length	1889 bases	Strand	Minus strand
Position	6 : 53803053 - 53804941	RNA binding domain	PRP4 , Prp18
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PRQ26095	PRP4	PF08799	4.7e-12	1
PRQ26095	Prp18	PF02840	9.2e-57	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PRQ26095	1370	420aa	PRQ26095

Gene Model

Click here to download RchiOBHm_Chr6g0290841's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download RchiOBHm_Chr6g0290841's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr6g0290841

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr6g0290841

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression