RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	RchiOBHm_Chr6g0247831	Gene ID		Accession	-
Symbol		Alias	-	Full Name	putative aspartate--tRNA ligase
Status	Confidence	Length	5815 bases	Strand	Minus strand
Position	6 : 3842541 - 3848355	RNA binding domain	tRNA_anti-codon , tRNA-synt_2 , GAD
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PRQ22216	tRNA_anti-codon	PF01336	4e-12	1
PRQ22216	tRNA-synt_2	PF00152	5.7e-106	2
PRQ22216	GAD	PF02938	3.2e-20	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PRQ22216	2361	667aa	PRQ22216

Gene Model

Click here to download RchiOBHm_Chr6g0247831's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download RchiOBHm_Chr6g0247831's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr6g0247831

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr6g0247831

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression