RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	RchiOBHm_Chr5g0033281	Gene ID		Accession	-
Symbol		Alias	-	Full Name	putative photosystem II S4
Status	Confidence	Length	4137 bases	Strand	Minus strand
Position	5 : 27096812 - 27100948	RNA binding domain	YlmH_RBD , S4
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PRQ31239	YlmH_RBD	PF17774	5.5e-14	1
PRQ31239	S4	PF01479	3.1e-07	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PRQ31239	1187	322aa	PRQ31239

Gene Model

Click here to download RchiOBHm_Chr5g0033281's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download RchiOBHm_Chr5g0033281's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr5g0033281

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr5g0033281

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression