RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	RchiOBHm_Chr5g0019781	Gene ID		Accession	-
Symbol		Alias	-	Full Name	putative Zinc finger, ZPR1-type
Status	Confidence	Length	6788 bases	Strand	Plus strand
Position	5 : 14198431 - 14205218	RNA binding domain	zf-ZPR1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PRQ29991	zf-ZPR1	PF03367	2.9e-108	1
PRQ29991	zf-ZPR1	PF03367	2.9e-108	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PRQ29991	1906	507aa	PRQ29991

Gene Model

Click here to download RchiOBHm_Chr5g0019781's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download RchiOBHm_Chr5g0019781's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr5g0019781

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr5g0019781

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression