RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	RchiOBHm_Chr5g0011081	Gene ID		Accession	-
Symbol		Alias	-	Full Name	putative lysine--tRNA ligase
Status	Confidence	Length	3930 bases	Strand	Minus strand
Position	5 : 7336033 - 7339962	RNA binding domain	tRNA_anti-codon , tRNA-synt_2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PRQ29179	tRNA_anti-codon	PF01336	1.2e-08	1
PRQ29179	tRNA-synt_2	PF00152	4.4e-79	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PRQ29179	2095	622aa	PRQ29179

Gene Model

Click here to download RchiOBHm_Chr5g0011081's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download RchiOBHm_Chr5g0011081's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr5g0011081

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr5g0011081

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression