RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	RchiOBHm_Chr4g0401131	Gene ID		Accession	-
Symbol		Alias	-	Full Name	putative lysine--tRNA ligase
Status	Confidence	Length	4729 bases	Strand	Minus strand
Position	4 : 19113986 - 19118714	RNA binding domain	tRNA_anti-codon , tRNA-synt_2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PRQ37308	tRNA_anti-codon	PF01336	9.4e-11	1
PRQ37308	tRNA-synt_2	PF00152	4.7e-85	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PRQ37308	2234	612aa	PRQ37308

Gene Model

Click here to download RchiOBHm_Chr4g0401131's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download RchiOBHm_Chr4g0401131's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr4g0401131

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr4g0401131

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression