RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	RchiOBHm_Chr3g0480371	Gene ID		Accession	-
Symbol		Alias	-	Full Name	putative 60S ribosomal protein L6E
Status	Confidence	Length	2076 bases	Strand	Plus strand
Position	3 : 26210224 - 26212299	RNA binding domain	Ribosomal_L6e , Ribosomal_L6e_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PRQ44539	Ribosomal_L6e	PF01159	7.5e-40	1
PRQ44539	Ribosomal_L6e_N	PF03868	9.4e-16	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PRQ44539	1039	233aa	PRQ44539

Gene Model

Click here to download RchiOBHm_Chr3g0480371's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download RchiOBHm_Chr3g0480371's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr3g0480371

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr3g0480371

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression