RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	RchiOBHm_Chr3g0459081	Gene ID		Accession	-
Symbol		Alias	-	Full Name	putative RNA helicase transcription factor interactor and regulator CCHC(Zn) family
Status	Confidence	Length	5592 bases	Strand	Plus strand
Position	3 : 7601825 - 7607416	RNA binding domain	ResIII , DEAD , GUCT , zf-CCHC
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PRQ42569	ResIII	PF04851	7.9e-05	1
PRQ42569	DEAD	PF00270	3.6e-48	2
PRQ42569	GUCT	PF08152	2.4e-09	3
PRQ42569	zf-CCHC	PF00098	1.3e-06	4

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PRQ42569	3209	759aa	PRQ42569

Gene Model

Click here to download RchiOBHm_Chr3g0459081's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download RchiOBHm_Chr3g0459081's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr3g0459081

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr3g0459081

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression