RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	RchiOBHm_Chr2g0140061	Gene ID		Accession	-
Symbol		Alias	-	Full Name	putative RNA recognition motif domain, RNA-recognition motif (RRM) Nup35-type
Status	Confidence	Length	4954 bases	Strand	Minus strand
Position	2 : 57417290 - 57422243	RNA binding domain	Nup35_RRM , Nup35_RRM_2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PRQ51054	Nup35_RRM	PF05172	2.1e-22	1
PRQ51054	Nup35_RRM_2	PF14605	1e-07	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PRQ51054	2648	332aa	PRQ51054

Gene Model

Click here to download RchiOBHm_Chr2g0140061's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download RchiOBHm_Chr2g0140061's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr2g0140061

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
RchiOBHm_Chr2g0140061

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression