RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	QL93p2022_0222	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	2604 bases	Strand	Minus strand
Position	Scq3eQI_2022 : 220202 - 222805	RNA binding domain	Ribosomal_L6e , Ribosomal_L6e_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
QL93p2022_0222:mrna	Ribosomal_L6e	PF01159	1.3e-39	1
QL93p2022_0222:mrna	Ribosomal_L6e_N	PF03868	4.1e-15	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	QL93p2022_0222:mrna	1370	235aa	QL93p2022_0222:mrna

Gene Model

Click here to download QL93p2022_0222's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download QL93p2022_0222's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
QL93p2022_0222

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
QL93p2022_0222

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression