Description

Ensembl ID Psat5g080840 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 8072 bases Strand Plus strand
Position 5LG3 : 146134689 - 146142760 RNA binding domain KOW , Spt5-NGN , Spt5_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Psat5g080840 KOW PF00467 1.2e-26 1
Psat5g080840 KOW PF00467 1.4e-26 2
Psat5g080840 Spt5-NGN PF03439 1.3e-25 3
Psat5g080840 Spt5-NGN PF03439 1.6e-25 4
Psat5g080840 Spt5_N PF11942 7.5e-14 5
Psat5g080840 Spt5_N PF11942 8.5e-14 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Psat5g080840.2 4806 932aa Psat5g080840.2.cds
- Psat5g080840.1 3898 1033aa Psat5g080840.1.cds

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Psat5g080840

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Psat5g080840

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression