RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Psat4g045640	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	12279 bases	Strand	Plus strand
Position	4LG4 : 78212098 - 78224376	RNA binding domain	DUF1604 , Surp
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Psat4g045640	DUF1604	PF07713	6.8e-33	1
Psat4g045640	Surp	PF01805	4.5e-09	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Psat4g045640.1	4271	1035aa	Psat4g045640.1.cds

Gene Model

Click here to download Psat4g045640's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Psat4g045640's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Psat4g045640

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Psat4g045640

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression