RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Psat0s1094g0080	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3073 bases	Strand	Minus strand
Position	CAADHX020003195.1 : 74394 - 77466	RNA binding domain	PC4 , zf-CCHC
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Psat0s1094g0080	PC4	PF02229	1.3e-21	1
Psat0s1094g0080	zf-CCHC	PF00098	7e-05	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Psat0s1094g0080.1	1398	396aa	Psat0s1094g0080.1.cds

Gene Model

Click here to download Psat0s1094g0080's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Psat0s1094g0080's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Psat0s1094g0080

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Psat0s1094g0080

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression