RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Prudul26B032142	Gene ID		Accession	-
Symbol		Alias	-	Full Name	PREDICTED: nucleolar
Status	Confidence	Length	3201 bases	Strand	Minus strand
Position	pdulcis26_s0006 : 853087 - 856287	RNA binding domain	Nop , NOP5NT
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
VVA12819	Nop	PF01798	1.4e-81	1
VVA12819	NOP5NT	PF08156	1.4e-20	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	VVA12819	2198	539aa	VVA12819

Gene Model

Click here to download Prudul26B032142's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Prudul26B032142's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Prudul26B032142

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Prudul26B032142

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression