RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Prudul26B026087	Gene ID		Accession	-
Symbol		Alias	-	Full Name	PREDICTED: squamous cell carcinoma
Status	Confidence	Length	14330 bases	Strand	Minus strand
Position	pdulcis26_s0113 : 139594 - 153923	RNA binding domain	RRM_1 , Lsm_interact
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
VVA26915	RRM_1	PF00076	1.7e-12	1
VVA26915	Lsm_interact	PF05391	4.4e-07	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	VVA26915	3920	827aa	VVA26915

Gene Model

Click here to download Prudul26B026087's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Prudul26B026087's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Prudul26B026087

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Prudul26B026087

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression