RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | Prudul26B022713 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
PREDICTED: pre-mRNA-processing-splicing factor
|
Status |
Confidence |
Length |
10682 bases |
Strand |
Plus strand |
Position |
pdulcis26_s0039 : 40783 - 51464 |
RNA binding domain |
PROCT , PRP8_domainIV , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
VVA19824 |
PROCT |
PF08084 |
7.6e-50 |
1 |
VVA19824 |
PRP8_domainIV |
PF12134 |
3.4e-129 |
2 |
VVA19824 |
PRO8NT |
PF08082 |
3.3e-85 |
3 |
VVA19824 |
U6-snRNA_bdg |
PF10596 |
2e-90 |
4 |
VVA19824 |
PROCN |
PF08083 |
3e-234 |
5 |
VVA19824 |
RRM_4 |
PF10598 |
6.8e-47 |
6 |
VVA19824 |
U5_2-snRNA_bdg |
PF10597 |
1.1e-71 |
7 |
VVA19825 |
PRP8_domainIV |
PF12134 |
3.1e-129 |
1 |
VVA19825 |
PRO8NT |
PF08082 |
2.5e-85 |
2 |
VVA19825 |
U6-snRNA_bdg |
PF10596 |
1.7e-90 |
3 |
VVA19825 |
PROCN |
PF08083 |
2.7e-234 |
4 |
VVA19825 |
RRM_4 |
PF10598 |
6.2e-47 |
5 |
VVA19825 |
U5_2-snRNA_bdg |
PF10597 |
1e-71 |
6 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
VVA19824 |
7595 |
2347aa |
VVA19824 |
- |
VVA19825 |
6627 |
2208aa |
VVA19825 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
Prudul26B022713 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
Prudul26B022713 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |