Description

Ensembl ID Prudul26B022713 Gene ID Accession -
Symbol Alias - Full Name PREDICTED: pre-mRNA-processing-splicing factor
Status Confidence Length 10682 bases Strand Plus strand
Position pdulcis26_s0039 : 40783 - 51464 RNA binding domain PROCT , PRP8_domainIV , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
VVA19824 PROCT PF08084 7.6e-50 1
VVA19824 PRP8_domainIV PF12134 3.4e-129 2
VVA19824 PRO8NT PF08082 3.3e-85 3
VVA19824 U6-snRNA_bdg PF10596 2e-90 4
VVA19824 PROCN PF08083 3e-234 5
VVA19824 RRM_4 PF10598 6.8e-47 6
VVA19824 U5_2-snRNA_bdg PF10597 1.1e-71 7
VVA19825 PRP8_domainIV PF12134 3.1e-129 1
VVA19825 PRO8NT PF08082 2.5e-85 2
VVA19825 U6-snRNA_bdg PF10596 1.7e-90 3
VVA19825 PROCN PF08083 2.7e-234 4
VVA19825 RRM_4 PF10598 6.2e-47 5
VVA19825 U5_2-snRNA_bdg PF10597 1e-71 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- VVA19824 7595 2347aa VVA19824
- VVA19825 6627 2208aa VVA19825

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Prudul26B022713

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Prudul26B022713

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression