Description

Ensembl ID Prudul26B000477 Gene ID Accession -
Symbol Alias - Full Name PREDICTED: pentatricopeptide
Status Confidence Length 244685 bases Strand Minus strand
Position pdulcis26_s0003 : 1621405 - 1866089 RNA binding domain PPR_3 , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
VVA11193 PPR_3 PF13812 2.5e-42 1
VVA11193 PPR_3 PF13812 2.5e-42 2
VVA11193 PPR_3 PF13812 2.5e-42 3
VVA11193 PPR PF01535 3.1e-98 4
VVA11193 PPR PF01535 3.1e-98 5
VVA11193 PPR PF01535 3.1e-98 6
VVA11193 PPR PF01535 3.1e-98 7
VVA11193 PPR PF01535 3.1e-98 8
VVA11193 PPR PF01535 3.1e-98 9
VVA11193 PPR PF01535 3.1e-98 10
VVA11193 PPR PF01535 3.1e-98 11
VVA11193 PPR PF01535 3.1e-98 12
VVA11193 PPR PF01535 3.1e-98 13
VVA11193 PPR PF01535 3.1e-98 14
VVA11193 PPR PF01535 3.1e-98 15
VVA11193 PPR PF01535 3.1e-98 16
VVA11193 PPR PF01535 3.1e-98 17
VVA11193 PPR PF01535 3.1e-98 18
VVA11193 PPR PF01535 3.1e-98 19
VVA11193 PPR PF01535 3.1e-98 20

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- VVA11193 3477 1159aa VVA11193

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Prudul26B000477

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Prudul26B000477

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression