Description

Ensembl ID Prudul26B000358 Gene ID Accession -
Symbol Alias - Full Name PREDICTED: pentatricopeptide
Status Confidence Length 2057 bases Strand Plus strand
Position pdulcis26_s0047 : 395523 - 397579 RNA binding domain PPR_3 , PPR_long , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
VVA20827 PPR_3 PF13812 3.3e-48 1
VVA20827 PPR_3 PF13812 3.3e-48 2
VVA20827 PPR_3 PF13812 3.3e-48 3
VVA20827 PPR_3 PF13812 3.3e-48 4
VVA20827 PPR_3 PF13812 3.3e-48 5
VVA20827 PPR_long PF17177 4.2e-25 6
VVA20827 PPR_long PF17177 4.2e-25 7
VVA20827 PPR_long PF17177 4.2e-25 8
VVA20827 PPR PF01535 3.9e-85 9
VVA20827 PPR PF01535 3.9e-85 10
VVA20827 PPR PF01535 3.9e-85 11
VVA20827 PPR PF01535 3.9e-85 12
VVA20827 PPR PF01535 3.9e-85 13
VVA20827 PPR PF01535 3.9e-85 14
VVA20827 PPR PF01535 3.9e-85 15
VVA20827 PPR PF01535 3.9e-85 16
VVA20827 PPR PF01535 3.9e-85 17
VVA20827 PPR PF01535 3.9e-85 18

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- VVA20827 2057 387aa VVA20827

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Prudul26B000358

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Prudul26B000358

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression