Description

Ensembl ID Pp3c8_3120 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 6198 bases Strand Minus strand
Position 8 : 1612061 - 1618258 RNA binding domain LSM14 , SM-ATX , FDF
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Pp3c8_3120V3 LSM14 PF12701 6.1e-32 1
Pp3c8_3120V3 LSM14 PF12701 6.1e-32 2
Pp3c8_3120V3 LSM14 PF12701 6.1e-32 3
Pp3c8_3120V3 SM-ATX PF14438 2.6e-12 4
Pp3c8_3120V3 SM-ATX PF14438 2.6e-12 5
Pp3c8_3120V3 SM-ATX PF14438 2.6e-12 6
Pp3c8_3120V3 FDF PF09532 2.2e-14 7
Pp3c8_3120V3 FDF PF09532 2.2e-14 8
Pp3c8_3120V3 FDF PF09532 2.2e-14 9

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Pp3c8_3120V3.3 2971 650aa Pp3c8_3120V3.3
- Pp3c8_3120V3.2 3023 650aa Pp3c8_3120V3.2
- Pp3c8_3120V3.1 3026 651aa Pp3c8_3120V3.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Pp3c8_3120

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Pp3c8_3120

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression