Description

Ensembl ID Pp3c5_10580 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 6629 bases Strand Minus strand
Position 5 : 7610858 - 7617486 RNA binding domain PUF , CPL
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Pp3c5_10580V3 PUF PF00806 4.1e-12 1
Pp3c5_10580V3 PUF PF00806 4.1e-12 2
Pp3c5_10580V3 PUF PF00806 4.1e-12 3
Pp3c5_10580V3 PUF PF00806 4.1e-12 4
Pp3c5_10580V3 PUF PF00806 4.4e-12 5
Pp3c5_10580V3 PUF PF00806 4.4e-12 6
Pp3c5_10580V3 CPL PF08144 3.5e-14 7
Pp3c5_10580V3 CPL PF08144 3.5e-14 8
Pp3c5_10580V3 CPL PF08144 3.7e-14 9

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Pp3c5_10580V3.3 2195 649aa Pp3c5_10580V3.3
- Pp3c5_10580V3.1 2837 641aa Pp3c5_10580V3.1
- Pp3c5_10580V3.2 2758 641aa Pp3c5_10580V3.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Pp3c5_10580

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Pp3c5_10580

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression