Description

Ensembl ID Pp3c2_6540 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 7283 bases Strand Plus strand
Position 2 : 4337731 - 4345013 RNA binding domain POPLD , POP1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Pp3c2_6540V3 POPLD PF08170 6.9e-17 1
Pp3c2_6540V3 POPLD PF08170 7.3e-17 2
Pp3c2_6540V3 POPLD PF08170 7.5e-17 3
Pp3c2_6540V3 POPLD PF08170 7.8e-17 4
Pp3c2_6540V3 POPLD PF08170 9.3e-17 5
Pp3c2_6540V3 POPLD PF08170 9.3e-17 6
Pp3c2_6540V3 POP1 PF06978 4.3e-13 7
Pp3c2_6540V3 POP1 PF06978 4.3e-13 8

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Pp3c2_6540V3.4 2712 804aa Pp3c2_6540V3.4
- Pp3c2_6540V3.3 4239 1044aa Pp3c2_6540V3.3
- Pp3c2_6540V3.1 3941 1044aa Pp3c2_6540V3.1
- Pp3c2_6540V3.2 3934 825aa Pp3c2_6540V3.2
- Pp3c2_6540V3.5 2710 845aa Pp3c2_6540V3.5
- Pp3c2_6540V3.6 2617 737aa Pp3c2_6540V3.6

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Pp3c2_6540

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Pp3c2_6540

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression