Description

Ensembl ID Pp3c23_11510 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 9613 bases Strand Plus strand
Position 23 : 7867275 - 7876887 RNA binding domain RRM_1 , Surp , cwf21 , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Pp3c23_11510V3 RRM_1 PF00076 2.2e-12 1
Pp3c23_11510V3 RRM_1 PF00076 2.2e-12 2
Pp3c23_11510V3 RRM_1 PF00076 2.2e-12 3
Pp3c23_11510V3 Surp PF01805 5.8e-16 4
Pp3c23_11510V3 Surp PF01805 5.8e-16 5
Pp3c23_11510V3 Surp PF01805 5.9e-16 6
Pp3c23_11510V3 cwf21 PF08312 1.4e-06 7
Pp3c23_11510V3 cwf21 PF08312 1.4e-06 8
Pp3c23_11510V3 cwf21 PF08312 1.4e-06 9
Pp3c23_11510V3 CID PF04818 1.5e-06 10
Pp3c23_11510V3 CID PF04818 1.5e-06 11
Pp3c23_11510V3 CID PF04818 1.5e-06 12

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Pp3c23_11510V3.1 3773 1100aa Pp3c23_11510V3.1
- Pp3c23_11510V3.2 3743 1085aa Pp3c23_11510V3.2
- Pp3c23_11510V3.3 4024 1099aa Pp3c23_11510V3.3

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Pp3c23_11510

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Pp3c23_11510

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression