Description

Ensembl ID Pp3c1_23520 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 3410 bases Strand Minus strand
Position 1 : 17298584 - 17301993 RNA binding domain 5_3_exonuc_N , 5_3_exonuc
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PAC:32968267 5_3_exonuc_N PF02739 1.3e-21 1
PAC:32968267 5_3_exonuc PF01367 1.3e-11 2
PAC:32968268 5_3_exonuc_N PF02739 1.3e-21 1
PAC:32968268 5_3_exonuc PF01367 1.3e-11 2
PAC:32968269 5_3_exonuc_N PF02739 1.3e-21 1
PAC:32968269 5_3_exonuc PF01367 1.3e-11 2
PAC:32968270 5_3_exonuc_N PF02739 1.3e-21 1
PAC:32968270 5_3_exonuc PF01367 1.3e-11 2
PAC:32968271 5_3_exonuc_N PF02739 1.3e-21 1
PAC:32968271 5_3_exonuc PF01367 1.3e-11 2
PAC:32968272 5_3_exonuc_N PF02739 1.3e-21 1
PAC:32968272 5_3_exonuc PF01367 1.3e-11 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Pp3c1_23520V3.4 2603 507aa PAC:32968270.CDS.1
- Pp3c1_23520V3.3 2363 507aa PAC:32968269.CDS.1
- Pp3c1_23520V3.1 2271 507aa PAC:32968267.CDS.1
- Pp3c1_23520V3.5 2622 507aa PAC:32968271.CDS.1
- Pp3c1_23520V3.2 2344 507aa PAC:32968268.CDS.1
- Pp3c1_23520V3.6 2611 507aa PAC:32968272.CDS.1
- Pp3c1_23520V3.7 432 68aa PAC:32968273.CDS.1

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Pp3c1_23520

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Pp3c1_23520

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression