Description

Ensembl ID POPTR_017G124500v3 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 15837 bases Strand Minus strand
Position 17 : 13655730 - 13671566 RNA binding domain tRNA-synt_1g , Val_tRNA-synt_C , tRNA-synt_1 , Anticodon_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PNS96570 tRNA-synt_1g PF09334 7.5e-25 1
PNS96570 tRNA-synt_1g PF09334 7.5e-25 2
PNS96570 tRNA-synt_1g PF09334 7.5e-25 3
PNS96570 Val_tRNA-synt_C PF10458 1.8e-13 4
PNS96570 tRNA-synt_1 PF00133 6.9e-203 5
PNS96570 Anticodon_1 PF08264 2.2e-39 6
PNS96569 tRNA-synt_1g PF09334 8.7e-25 1
PNS96569 tRNA-synt_1g PF09334 8.7e-25 2
PNS96569 tRNA-synt_1g PF09334 8.7e-25 3
PNS96569 Val_tRNA-synt_C PF10458 1.7e-13 4
PNS96569 tRNA-synt_1 PF00133 8.5e-203 5
PNS96569 Anticodon_1 PF08264 2.3e-39 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
POPTR_017G124500v3

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
POPTR_017G124500v3

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression