Description

Ensembl ID POPTR_003G031900v3 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 11400 bases Strand Plus strand
Position 3 : 4017342 - 4028741 RNA binding domain PROCT , PRP8_domainIV , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PNT43399 PROCT PF08084 1.8e-50 1
PNT43399 PRP8_domainIV PF12134 1.2e-128 2
PNT43399 PRO8NT PF08082 1.1e-84 3
PNT43399 U6-snRNA_bdg PF10596 5.8e-90 4
PNT43399 PROCN PF08083 3.7e-233 5
PNT43399 RRM_4 PF10598 1.5e-46 6
PNT43399 U5_2-snRNA_bdg PF10597 2.6e-71 7
PNT43398 PRP8_domainIV PF12134 1.1e-128 1
PNT43398 PRO8NT PF08082 7.3e-85 2
PNT43398 U6-snRNA_bdg PF10596 4.1e-90 3
PNT43398 PROCN PF08083 2.8e-233 4
PNT43398 RRM_4 PF10598 1.3e-46 5
PNT43398 U5_2-snRNA_bdg PF10597 2.1e-71 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
POPTR_003G031900v3

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
POPTR_003G031900v3

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression