Description

Ensembl ID POPTR_001G030700v3 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase subunit beta
Status Confidence Length 9395 bases Strand Minus strand
Position 1 : 2258649 - 2268043 RNA binding domain RNA_pol_Rpa2_4 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_6
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PNT52418 RNA_pol_Rpa2_4 PF06883 9.8e-18 1
PNT52418 RNA_pol_Rpb2_3 PF04565 1.9e-26 2
PNT52418 RNA_pol_Rpb2_6 PF00562 4.3e-73 3
PNT52417 RNA_pol_Rpa2_4 PF06883 1.4e-17 1
PNT52417 RNA_pol_Rpb2_3 PF04565 3.5e-26 2
PNT52417 RNA_pol_Rpb2_7 PF04560 1.1e-22 3
PNT52417 RNA_pol_Rpb2_6 PF00562 2.3e-110 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
POPTR_001G030700v3

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
POPTR_001G030700v3

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression