Description

Ensembl ID PGSC0003DMG400025766 Gene ID Accession -
Symbol Alias - Full Name Ribosomal pseudouridine synthase
Status Confidence Length 5634 bases Strand Plus strand
Position 1 : 84001763 - 84007396 RNA binding domain PseudoU_synth_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PGSC0003DMT400066211 PseudoU_synth_2 PF00849 4.9e-28 1
PGSC0003DMT400066213 PseudoU_synth_2 PF00849 1.7e-15 1
PGSC0003DMT400066215 PseudoU_synth_2 PF00849 6.1e-13 1
PGSC0003DMT400066216 PseudoU_synth_2 PF00849 5.1e-08 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- PGSC0003DMT400066211 2196 467aa PGSC0003DMT400066211
- PGSC0003DMT400066212 2188 225aa PGSC0003DMT400066212
- PGSC0003DMT400066213 2186 317aa PGSC0003DMT400066213
- PGSC0003DMT400066214 790 249aa PGSC0003DMT400066214
- PGSC0003DMT400066215 1951 231aa PGSC0003DMT400066215
- PGSC0003DMT400066216 1356 159aa PGSC0003DMT400066216

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
PGSC0003DMG400025766

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
PGSC0003DMG400025766

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression