Description

Ensembl ID PGSC0003DMG400009884 Gene ID Accession -
Symbol Alias - Full Name RNA pseudourine synthase 2, chloroplastic
Status Confidence Length 3796 bases Strand Plus strand
Position 4 : 71193864 - 71197659 RNA binding domain PseudoU_synth_2 , S4
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PGSC0003DMT400025583 PseudoU_synth_2 PF00849 6.6e-28 1
PGSC0003DMT400025583 S4 PF01479 4.9e-07 2
PGSC0003DMT400025582 PseudoU_synth_2 PF00849 6.8e-09 1
PGSC0003DMT400025582 S4 PF01479 2.2e-07 2
PGSC0003DMT400025584 PseudoU_synth_2 PF00849 6.8e-09 1
PGSC0003DMT400025584 S4 PF01479 2.2e-07 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- PGSC0003DMT400025582 1533 249aa PGSC0003DMT400025582
- PGSC0003DMT400025583 2207 431aa PGSC0003DMT400025583
- PGSC0003DMT400025584 2233 249aa PGSC0003DMT400025584

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
PGSC0003DMG400009884

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
PGSC0003DMG400009884

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression