RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | PGSC0003DMG400001863 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
Nonsense-mediated mRNA decay protein |
Status |
Confidence |
Length |
19136 bases |
Strand |
Plus strand |
Position |
8 : 50247069 - 50266204 |
RNA binding domain |
ResIII , UPF1_1B_dom , UPF1_Zn_bind |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
PGSC0003DMT400004711 |
ResIII |
PF04851 |
5.2e-05 |
1 |
PGSC0003DMT400004711 |
UPF1_1B_dom |
PF18141 |
2e-29 |
2 |
PGSC0003DMT400004711 |
UPF1_Zn_bind |
PF09416 |
4.8e-73 |
3 |
PGSC0003DMT400004710 |
ResIII |
PF04851 |
5.3e-05 |
1 |
PGSC0003DMT400004710 |
UPF1_1B_dom |
PF18141 |
2e-29 |
2 |
PGSC0003DMT400004710 |
UPF1_Zn_bind |
PF09416 |
5.1e-73 |
3 |
PGSC0003DMT400004712 |
ResIII |
PF04851 |
5.4e-05 |
1 |
PGSC0003DMT400004712 |
UPF1_1B_dom |
PF18141 |
2.1e-29 |
2 |
PGSC0003DMT400004712 |
UPF1_Zn_bind |
PF09416 |
5.3e-73 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
PGSC0003DMT400004710 |
4840 |
1176aa |
PGSC0003DMT400004710 |
- |
PGSC0003DMT400004711 |
4857 |
1152aa |
PGSC0003DMT400004711 |
- |
PGSC0003DMT400004712 |
4565 |
1199aa |
PGSC0003DMT400004712 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
PGSC0003DMG400001863 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
PGSC0003DMG400001863 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |