RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	PGSC0003DMG400000632	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Pentatricopeptide repeat-containing protein
Status	Confidence	Length	4132 bases	Strand	Minus strand
Position	3 : 56394225 - 56398356	RNA binding domain	PPR_3 , PPR_long , PPR
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
PGSC0003DMT400001689	PPR_3	PF13812	7.1e-65	1
PGSC0003DMT400001689	PPR_3	PF13812	7.1e-65	2
PGSC0003DMT400001689	PPR_3	PF13812	7.1e-65	3
PGSC0003DMT400001689	PPR_3	PF13812	7.1e-65	4
PGSC0003DMT400001689	PPR_3	PF13812	7.1e-65	5
PGSC0003DMT400001689	PPR_3	PF13812	7.1e-65	6
PGSC0003DMT400001689	PPR_3	PF13812	7.1e-65	7
PGSC0003DMT400001689	PPR_3	PF13812	7.1e-65	8
PGSC0003DMT400001689	PPR_long	PF17177	9e-36	9
PGSC0003DMT400001689	PPR_long	PF17177	9e-36	10
PGSC0003DMT400001689	PPR_long	PF17177	9e-36	11
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	12
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	13
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	14
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	15
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	16
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	17
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	18
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	19
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	20
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	21
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	22
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	23
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	24
PGSC0003DMT400001689	PPR	PF01535	2.2e-104	25
PGSC0003DMT400001690	PPR_3	PF13812	7.1e-65	1
PGSC0003DMT400001690	PPR_3	PF13812	7.1e-65	2
PGSC0003DMT400001690	PPR_3	PF13812	7.1e-65	3
PGSC0003DMT400001690	PPR_3	PF13812	7.1e-65	4
PGSC0003DMT400001690	PPR_3	PF13812	7.1e-65	5
PGSC0003DMT400001690	PPR_3	PF13812	7.1e-65	6
PGSC0003DMT400001690	PPR_3	PF13812	7.1e-65	7
PGSC0003DMT400001690	PPR_3	PF13812	7.1e-65	8
PGSC0003DMT400001690	PPR_long	PF17177	9e-36	9
PGSC0003DMT400001690	PPR_long	PF17177	9e-36	10
PGSC0003DMT400001690	PPR_long	PF17177	9e-36	11
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	12
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	13
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	14
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	15
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	16
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	17
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	18
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	19
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	20
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	21
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	22
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	23
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	24
PGSC0003DMT400001690	PPR	PF01535	2.2e-104	25
PGSC0003DMT400001691	PPR_3	PF13812	7.1e-65	1
PGSC0003DMT400001691	PPR_3	PF13812	7.1e-65	2
PGSC0003DMT400001691	PPR_3	PF13812	7.1e-65	3
PGSC0003DMT400001691	PPR_3	PF13812	7.1e-65	4
PGSC0003DMT400001691	PPR_3	PF13812	7.1e-65	5
PGSC0003DMT400001691	PPR_3	PF13812	7.1e-65	6
PGSC0003DMT400001691	PPR_3	PF13812	7.1e-65	7
PGSC0003DMT400001691	PPR_3	PF13812	7.1e-65	8
PGSC0003DMT400001691	PPR_long	PF17177	9e-36	9
PGSC0003DMT400001691	PPR_long	PF17177	9e-36	10
PGSC0003DMT400001691	PPR_long	PF17177	9e-36	11
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	12
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	13
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	14
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	15
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	16
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	17
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	18
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	19
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	20
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	21
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	22
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	23
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	24
PGSC0003DMT400001691	PPR	PF01535	2.2e-104	25

Showing 1 to 75 of 75 entries

Pubmed ID	Full Name	Cell	Author	Time	Doi
No data available in table

Pubmed ID	Title	Author	Time	Journal
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Transcripts

Show entries

Search:

Name	Transcript ID	bp	Protein	Translation ID
-	PGSC0003DMT400001689	3771	816aa	PGSC0003DMT400001689
-	PGSC0003DMT400001690	3658	816aa	PGSC0003DMT400001690
-	PGSC0003DMT400001691	4038	816aa	PGSC0003DMT400001691