Description

Ensembl ID PGSC0003DMG400000611 Gene ID Accession -
Symbol Alias - Full Name Pentatricopeptide repeat-containing protein
Status Confidence Length 2970 bases Strand Plus strand
Position 3 : 56387086 - 56390055 RNA binding domain PPR_3 , PPR_long , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PGSC0003DMT400001642 PPR_3 PF13812 2.1e-36 1
PGSC0003DMT400001642 PPR_3 PF13812 2.1e-36 2
PGSC0003DMT400001642 PPR_3 PF13812 2.1e-36 3
PGSC0003DMT400001642 PPR_3 PF13812 2.1e-36 4
PGSC0003DMT400001642 PPR_long PF17177 1.8e-22 5
PGSC0003DMT400001642 PPR PF01535 2e-53 6
PGSC0003DMT400001642 PPR PF01535 2e-53 7
PGSC0003DMT400001642 PPR PF01535 2e-53 8
PGSC0003DMT400001642 PPR PF01535 2e-53 9
PGSC0003DMT400001642 PPR PF01535 2e-53 10
PGSC0003DMT400001642 PPR PF01535 2e-53 11
PGSC0003DMT400001642 PPR PF01535 2e-53 12
PGSC0003DMT400001642 PPR PF01535 2e-53 13

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- PGSC0003DMT400001642 2970 497aa PGSC0003DMT400001642

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
PGSC0003DMG400000611

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
PGSC0003DMG400000611

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression