Description

Ensembl ID PGSC0003DMG400000099 Gene ID Accession -
Symbol Alias - Full Name Pentatricopeptide repeat-containing protein, mitochondrial
Status Confidence Length 3229 bases Strand Plus strand
Position 1 : 73257318 - 73260546 RNA binding domain PPR_3 , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PGSC0003DMT400000295 PPR_3 PF13812 8.3e-44 1
PGSC0003DMT400000295 PPR_3 PF13812 8.3e-44 2
PGSC0003DMT400000295 PPR_3 PF13812 8.3e-44 3
PGSC0003DMT400000295 PPR_3 PF13812 8.3e-44 4
PGSC0003DMT400000295 PPR PF01535 2.2e-68 5
PGSC0003DMT400000295 PPR PF01535 2.2e-68 6
PGSC0003DMT400000295 PPR PF01535 2.2e-68 7
PGSC0003DMT400000295 PPR PF01535 2.2e-68 8
PGSC0003DMT400000295 PPR PF01535 2.2e-68 9
PGSC0003DMT400000295 PPR PF01535 2.2e-68 10
PGSC0003DMT400000295 PPR PF01535 2.2e-68 11
PGSC0003DMT400000295 PPR PF01535 2.2e-68 12
PGSC0003DMT400000295 PPR PF01535 2.2e-68 13
PGSC0003DMT400000295 PPR PF01535 2.2e-68 14
PGSC0003DMT400000294 PPR_3 PF13812 3.1e-40 1
PGSC0003DMT400000294 PPR_3 PF13812 3.1e-40 2
PGSC0003DMT400000294 PPR_3 PF13812 3.1e-40 3
PGSC0003DMT400000294 PPR_3 PF13812 3.1e-40 4
PGSC0003DMT400000294 PPR PF01535 3.3e-59 5
PGSC0003DMT400000294 PPR PF01535 3.3e-59 6
PGSC0003DMT400000294 PPR PF01535 3.3e-59 7
PGSC0003DMT400000294 PPR PF01535 3.3e-59 8
PGSC0003DMT400000294 PPR PF01535 3.3e-59 9
PGSC0003DMT400000294 PPR PF01535 3.3e-59 10
PGSC0003DMT400000294 PPR PF01535 3.3e-59 11
PGSC0003DMT400000294 PPR PF01535 3.3e-59 12
PGSC0003DMT400000294 PPR PF01535 3.3e-59 13

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- PGSC0003DMT400000294 1767 588aa PGSC0003DMT400000294
- PGSC0003DMT400000295 3229 932aa PGSC0003DMT400000295

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
PGSC0003DMG400000099

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
PGSC0003DMG400000099

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression