Description

Ensembl ID Os12g0414500 Gene ID Accession -
Symbol Alias - Full Name Aminoacyl-tRNA synthetase, class II (D, K and N)-like domain containing protein
Status Confidence Length 2881 bases Strand Minus strand
Position 12 : 12762896 - 12765776 RNA binding domain tRNA-synt_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Os12t0414500-01 tRNA-synt_2 PF00152 2.7e-57 1
Os12t0414500-01 tRNA-synt_2 PF00152 2.7e-57 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Os12t0414500-01 2068 615aa Os12t0414500-01

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Os12g0414500oryza_sativaOs01t0372700-0159.928439.356oryza_sativaOs12t0414500-0154.471535.7724
Os12g0414500oryza_sativaOs07t0485400-0152.96837.8995oryza_sativaOs12t0414500-0118.861813.4959
Os12g0414500oryza_sativaOs02t0686400-0135.519117.122oryza_sativaOs12t0414500-0131.707315.2846
Os12g0414500oryza_sativaOs02t0139600-0132.577917.847oryza_sativaOs12t0414500-0118.699210.2439
Os12g0414500oryza_sativaOs01t0153400-0120.57299.11458oryza_sativaOs12t0414500-0112.84555.69106
Os12g0414500oryza_sativaOs02t0623500-0125.597313.8225oryza_sativaOs12t0414500-0124.390213.1707
Os12g0414500oryza_sativaOs03t0586800-0225.581413.6213oryza_sativaOs12t0414500-0125.040713.3333

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Os12g0414500oryza_sativaOs12t0414500-0146.991930.5691chlamydomonas_reinhardtiiPNW8558957.837.6
Os12g0414500oryza_sativaOs12t0414500-0155.284636.5854physcomitrium_patensPp3c12_7710V3.258.31938.5935
Os12g0414500oryza_sativaOs12t0414500-0154.634136.0976physcomitrium_patensPp3c12_7760V3.161.42640.585
Os12g0414500oryza_sativaOs12t0414500-0129.918721.3008papaver_somniferumRZC6858058.598741.7197
Os12g0414500oryza_sativaOs12t0414500-0159.512241.7886papaver_somniferumRZC6329757.728740.5363
Os12g0414500oryza_sativaOs12t0414500-0160.162641.1382cannabis_sativa_femalecds.evm.model.04.217257.993739.6552
Os12g0414500oryza_sativaOs12t0414500-0130.569122.2764ficus_caricaFCD_00000194-RA:cds65.734347.9021
Os12g0414500oryza_sativaOs12t0414500-0160.650441.9512beta_vulgarisKMS9572757.561739.8148
Os12g0414500oryza_sativaOs12t0414500-0159.349641.3008citrullus_lanatusCla97C09G171200.158.966141.0339
Os12g0414500oryza_sativaOs12t0414500-0161.463442.7642theobroma_cacaoEOX9377461.066242.4879
Os12g0414500oryza_sativaOs12t0414500-0160.162642.2764cucumis_meloMELO3C021113.2.160.358942.4144
Os12g0414500oryza_sativaOs12t0414500-0142.764228.4553chondrus_crispusCDF3372648.345632.1691
Os12g0414500oryza_sativaOs12t0414500-0159.674841.7886cucumis_sativusKGN4465759.869541.925
Os12g0414500oryza_sativaOs12t0414500-0159.18740.4878populus_trichocarpaPotri.002G249700.3.v4.151.778135.4196
Os12g0414500oryza_sativaOs12t0414500-0158.699240.6504arabidopsis_thalianaAT3G07420.156.583139.185
Os12g0414500oryza_sativaOs12t0414500-0150.406534.1463marchantia_polymorphaPTQ3985458.380439.548
Os12g0414500oryza_sativaOs12t0414500-0144.390228.2927brassica_junceacds.BjuB01g03570S51.509432.8302
Os12g0414500oryza_sativaOs12t0414500-0159.349640.9756brassica_junceacds.BjuB03g39330S57.661939.8104
Os12g0414500oryza_sativaOs12t0414500-0159.18740.4878brassica_junceacds.BjuA03g28070S56.086338.3667
Os12g0414500oryza_sativaOs12t0414500-0159.837440.4878brassica_junceacds.BjuA05g35210S57.680339.0282
Os12g0414500oryza_sativaOs12t0414500-0117.886213.6585brassica_napusCDY0800070.967754.1936
Os12g0414500oryza_sativaOs12t0414500-0158.861840.3252brassica_napusCDX7404758.105939.8074
Os12g0414500oryza_sativaOs12t0414500-0160.325241.626brassica_napusCDY3593058.517340.3785
Os12g0414500oryza_sativaOs12t0414500-016040.9756brassica_napusCDY2805158.293839.8104
Os12g0414500oryza_sativaOs12t0414500-0159.024441.1382brassica_napusCDY0799858.928641.0714
Os12g0414500oryza_sativaOs12t0414500-0161.951242.439prunus_dulcisVVA3363661.155741.8941
Os12g0414500oryza_sativaOs12t0414500-0162.113842.439prunus_persicaONH9272861.316241.8941
Os12g0414500oryza_sativaOs12t0414500-0159.512241.1382cajanus_cajanC.cajan_23865.t58.095240.1587
Os12g0414500oryza_sativaOs12t0414500-0155.93537.8862malus_domestica_goldenmRNA:MD10G012890061.428641.6071
Os12g0414500oryza_sativaOs12t0414500-0161.951242.1138malus_domestica_goldenmRNA:MD05G013440061.057741.5064
Os12g0414500oryza_sativaOs12t0414500-0160.162640.9756lupinus_angustifoliusOIW1764659.3940.4494
Os12g0414500oryza_sativaOs12t0414500-0159.024441.626medicago_truncatulaAET0135457.34640.4423
Os12g0414500oryza_sativaOs12t0414500-0159.674842.2764pisum_sativumPsat0s4060g0160.1.cds58.25441.2698
Os12g0414500oryza_sativaOs12t0414500-0158.37440phaseolus_vulgarisESW0624056.269638.558
Os12g0414500oryza_sativaOs12t0414500-0158.211438.6992vigna_unguiculataVigun10g030300.1.v1.256.466937.5394
Os12g0414500oryza_sativaOs12t0414500-0159.837441.3008glycine_maxKRH6619157.5939.7496
Os12g0414500oryza_sativaOs12t0414500-0158.048840.3252glycine_maxKRH0736757.211539.7436
Os12g0414500oryza_sativaOs12t0414500-0157.56140.6504manihot_esculentaOAY3288854.798838.6997
Os12g0414500oryza_sativaOs12t0414500-0158.861841.9512manihot_esculentaOAY3485855.864239.8148
Os12g0414500oryza_sativaOs12t0414500-016041.9512capsicum_annuumPHT7290560.294142.1569
Os12g0414500oryza_sativaOs12t0414500-0159.512241.4634solanum_lycopersicumSolyc09g057950.3.160.098541.8719
Os12g0414500oryza_sativaOs12t0414500-0159.512242.1138solanum_tuberosumPGSC0003DMT40005671060.296542.6689
Os12g0414500oryza_sativaOs12t0414500-0159.837441.9512sesamum_indicumSIN_1010645.t60.826442.6446
Os12g0414500oryza_sativaOs12t0414500-0159.024441.1382helianthus_annuusmRNA:HanXRQr2_Chr03g011586159.313741.3399
Os12g0414500oryza_sativaOs12t0414500-0160.325241.4634helianthus_annuusmRNA:HanXRQr2_Chr01g000462158.333340.0943
Os12g0414500oryza_sativaOs12t0414500-0159.18741.1382lactuca_sativacds-PLY94197.157.686240.0951
Os12g0414500oryza_sativaOs12t0414500-0190.406589.7561oryza_longistaminataKN540138.1_FGP00198.756798.0462
Os12g0414500oryza_sativaOs12t0414500-0197.56197.3984oryza_rufipogonORUFI12G10730.198.846898.682
Os12g0414500oryza_sativaOs12t0414500-0196.422894.6341oryza_punctataOPUNC12G08710.196.895495.098
Os12g0414500oryza_sativaOs12t0414500-0178.861872.6829oryza_brachyanthaOB12G18440.191.337184.1808
Os12g0414500oryza_sativaOs12t0414500-0199.512299.3496oryza_glaberrimaORGLA12G0091100.199.512299.3496
Os12g0414500oryza_sativaOs12t0414500-0177.073266.1789setaria_italicaKQL1618577.832566.8309
Os12g0414500oryza_sativaOs12t0414500-0125.203321.9512setaria_viridisTKW2817878.680268.5279
Os12g0414500oryza_sativaOs12t0414500-0164.390246.9919asparagus_officinalisONK7820066.220748.3278
Os12g0414500oryza_sativaOs12t0414500-0167.967550.8943ananas_comosusAco021413.1.mrna162.1146.5082
Os12g0414500oryza_sativaOs12t0414500-0134.308920.813drosophila_melanogasterFBpp008620545.869627.8261
Os12g0414500oryza_sativaOs12t0414500-0131.544717.8862caenorhabditis_elegansY66D12A.23.146.411526.3158
Os12g0414500oryza_sativaOs12t0414500-0138.861825.6911homo_sapiensENSP0000028103850.104833.1237
Os12g0414500oryza_sativaOs12t0414500-0161.138241.626vitis_viniferaVitvi07g04391_P00161.94442.1746
Os12g0414500oryza_sativaOs12t0414500-0159.837441.9512amborella_trichopodaERN1181757.054340
Os12g0414500oryza_sativaOs12t0414500-0158.699241.9512ipomoea_trilobaitb07g18290.t159.966842.8571
Os12g0414500oryza_sativaOs12t0414500-0160.325242.439fraxinus_excelsiorFRAEX38873_v2_000115470.1.cds60.52242.5775
Os12g0414500oryza_sativaOs12t0414500-0179.024466.5041eragrostis_curvulaTVU5059180.463667.7152
Os12g0414500oryza_sativaOs12t0414500-0159.674841.626arabis_alpinaKFK3820057.165139.8754
Os12g0414500oryza_sativaOs12t0414500-0160.487842.9268corylus_avellanaCav01g35030.t159.424942.1725
Os12g0414500oryza_sativaOs12t0414500-0159.024441.1382eutrema_salsugineumESQ4929256.807539.5931
Os12g0414500oryza_sativaOs12t0414500-0159.18739.8374chenopodium_quinoaAUR62001197-RA:cds59.090939.7727
Os12g0414500oryza_sativaOs12t0414500-0191.382191.0569oryza_barthiiOBART12G09700.199.46999.115
Os12g0414500oryza_sativaOs12t0414500-0136.74820.4878saccharomyces_cerevisiaeYCR024C45.93525.6098
Os12g0414500oryza_sativaOs12t0414500-0158.861841.1382arabidopsis_lyratafgenesh2_kg.3__763__AT3G07420.156.828939.7174
Os12g0414500oryza_sativaOs12t0414500-0158.699239.0244musa_acuminataMa08_p32300.157.210838.0349
Os12g0414500oryza_sativaOs12t0414500-0162.926844.7154musa_acuminataMa00_p01370.162.520244.4265
Os12g0414500oryza_sativaOs12t0414500-0175.121963.7398panicum_halliiPUZ6692377.647165.8824
Os12g0414500oryza_sativaOs12t0414500-0154.796734.7967chara_brauniiGBG7325057.410636.4566
Os12g0414500oryza_sativaOs12t0414500-016039.8374kalanchoe_fedtschenkoiKaladp0040s0721.1.v1.159.516139.5161
Os12g0414500oryza_sativaOs12t0414500-0160.81343.7398pistacia_veracds-EVM0026827.157.71641.5123
Os12g0414500oryza_sativaOs12t0414500-0149.756136.5854pistacia_veracds-EVM0008313.163.7546.875
Os12g0414500oryza_sativaOs12t0414500-0165.853747.1545dioscorea_rotundataDRNTG_11460.166.721647.7759
Os12g0414500oryza_sativaOs12t0414500-0161.62644.2276citrus_clementinaESR5046059.873642.97
Os12g0414500oryza_sativaOs12t0414500-0159.512241.4634quercus_subercds-POE83452.160.098541.8719
Os12g0414500oryza_sativaOs12t0414500-0199.512299.0244oryza_glumipatulaOGLUM12G10890.199.512299.0244
Os12g0414500oryza_sativaOs12t0414500-0159.18741.7886eucalyptus_grandisKCW5800156.609639.9689
Os12g0414500oryza_sativaOs12t0414500-0143.739831.3821cynara_cardunculusKVI0378258.733642.1397
Os12g0414500oryza_sativaOs12t0414500-0157.235840.1626corymbia_citriodoracds-KAF8014688.155.086138.6541
Os12g0414500oryza_sativaOs12t0414500-0160.162642.6016quercus_lobataQL09p045845:mrna58.176141.195
Os12g0414500oryza_sativaOs12t0414500-0154.959436.5854nymphaea_colorataNC2G0002480.1:cds57.777838.4615
Os12g0414500oryza_sativaOs12t0414500-0161.138240.4878rosa_chinensisPRQ2539059.968139.7129
Os12g0414500oryza_sativaOs12t0414500-0159.349641.3008olea_europaeaOE9A077280C160.530742.1227
Os12g0414500oryza_sativaOs12t0414500-0142.601627.3171cyanidioschyzon_merolaeCMR205CT39.69725.4545
Os12g0414500oryza_sativaOs12t0414500-0159.837443.5772gossypium_raimondiiKJB4258358.692242.7432
Os12g0414500oryza_sativaOs12t0414500-0154.471537.561gossypium_raimondiiKJB0876457.26539.4872
Os12g0414500oryza_sativaOs12t0414500-0143.25229.9187gossypium_raimondiiKJB1085654.06537.3984
Os12g0414500oryza_sativaOs12t0414500-0160.325243.0894trifolium_pratenseTp57577_TGAC_v2_mRNA209458.425241.7323
Os12g0414500oryza_sativaOs12t0414500-0161.463443.0894corchorus_capsularisOMO6003159.904941.9968
Os12g0414500oryza_sativaOs12t0414500-0179.024466.0163eragrostis_tefEt_10B_002765.CDS80.730967.4419
Os12g0414500oryza_sativaOs12t0414500-0137.723623.252ciona_savignyiENSCSAVP0000001911849.572730.5556
Os12g0414500oryza_sativaOs12t0414500-0159.349640.813brassica_rapa_ro18A03p037370.1_BraROA.158.587540.2889
Os12g0414500oryza_sativaOs12t0414500-016040.813brassica_rapa_ro18A05p050640.1_BraROA.157.83739.3417
Os12g0414500oryza_sativaOs12t0414500-0142.764226.9919galdieria_sulphurariaEME3199946.140429.1228
Os12g0414500oryza_sativaOs12t0414500-0159.18741.1382brassica_oleraceaBo3g061220.159.090941.0714
Os12g0414500oryza_sativaOs12t0414500-0117.886213.8211brassica_oleraceaBo3g061210.170.967754.8387
Os12g0414500oryza_sativaOs12t0414500-0160.162641.1382brassica_oleraceaBo5g141530.158.730240.1587
Os12g0414500oryza_sativaOs12t0414500-0190.894386.3415leersia_perrieriLPERR12G08190.191.489486.9067
Os12g0414500oryza_sativaOs12t0414500-0158.37441.4634arabidopsis_hallerig11824.t156.446540.0943
Os12g0414500oryza_sativaOs12t0414500-0159.18741.9512camelina_sativaCsa01g008430.137.564526.6254
Os12g0414500oryza_sativaOs12t0414500-0159.024441.7886camelina_sativaCsa15g009150.157.165440.4724
Os12g0414500oryza_sativaOs12t0414500-0158.861841.4634camelina_sativaCsa19g011140.156.562539.8438
Os12g0414500oryza_sativaOs12t0414500-0149.268331.2195ostreococcus_lucimarinusABO9861953.818834.103
Os12g0414500oryza_sativaOs12t0414500-0199.674899.3496oryza_indicaBGIOSGA036318-PA99.674899.3496
Os12g0414500oryza_sativaOs12t0414500-0156.260238.0488prunus_aviumPav_sc0000558.1_g050.1.mk:mrna59.861640.4844
Os12g0414500oryza_sativaOs12t0414500-0143.577229.7561juglans_regiacds.Jr05_05680_p153.49336.5269
Os12g0414500oryza_sativaOs12t0414500-0158.048841.3008juglans_regiacds.Jr05_05670_p157.487940.9018
Os12g0414500oryza_sativaOs12t0414500-0158.048841.3008juglans_regiacds.Jr14_06560_p156.132139.9371
Os12g0414500oryza_sativaOs12t0414500-0161.300843.4146coffea_canephoraCDP0394961.904843.8424
Os12g0414500oryza_sativaOs12t0414500-0166.666756.4228digitaria_exilisDexi3A01G0028700.1:cds77.212865.3484
Os12g0414500oryza_sativaOs12t0414500-0177.398464.8781digitaria_exilisDexi3B01G0029770.1:cds77.905165.3028
Os12g0414500oryza_sativaOs12t0414500-0158.699241.3008actinidia_chinensisPSS0961358.414241.1003
Os12g0414500oryza_sativaOs12t0414500-0159.512241.9512actinidia_chinensisPSR8631359.609142.0195
Os12g0414500oryza_sativaOs12t0414500-0157.56140.813daucus_carotaKZN1210956.012739.7152
Os12g0414500oryza_sativaOs12t0414500-0175.772463.5772echinochloa_crusgalliscaffold384.1.cds77.666765.1667
Os12g0414500oryza_sativaOs12t0414500-0175.447263.7398echinochloa_crusgalliscaffold235.2.cds72.613561.3459
Os12g0414500oryza_sativaOs12t0414500-0175.772464.2276echinochloa_crusgalliscaffold100.127.cds77.280365.5058
Os12g0414500oryza_sativaOs12t0414500-0199.674899.5122oryza_nivaraONIVA08G15080.199.674899.5122
Os12g0414500oryza_sativaOs12t0414500-0158.861840vigna_radiataVradi0441s00030.156.739838.558

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0009536- plastid1RCAOryza_sativa(39947)Component

Expression